本文翻譯自:Convert pandas dataframe to NumPy array
I am interested in knowing how to convert a pandas dataframe into a NumPy array. 我對知道如何將熊貓數據框轉換爲NumPy數組感興趣。
dataframe: 數據框:
import numpy as np
import pandas as pd
index = [1, 2, 3, 4, 5, 6, 7]
a = [np.nan, np.nan, np.nan, 0.1, 0.1, 0.1, 0.1]
b = [0.2, np.nan, 0.2, 0.2, 0.2, np.nan, np.nan]
c = [np.nan, 0.5, 0.5, np.nan, 0.5, 0.5, np.nan]
df = pd.DataFrame({'A': a, 'B': b, 'C': c}, index=index)
df = df.rename_axis('ID')
gives 給
label A B C
ID
1 NaN 0.2 NaN
2 NaN NaN 0.5
3 NaN 0.2 0.5
4 0.1 0.2 NaN
5 0.1 0.2 0.5
6 0.1 NaN 0.5
7 0.1 NaN NaN
I would like to convert this to a NumPy array, as so: 我想將其轉換爲NumPy數組,如下所示:
array([[ nan, 0.2, nan],
[ nan, nan, 0.5],
[ nan, 0.2, 0.5],
[ 0.1, 0.2, nan],
[ 0.1, 0.2, 0.5],
[ 0.1, nan, 0.5],
[ 0.1, nan, nan]])
How can I do this? 我怎樣才能做到這一點?
As a bonus, is it possible to preserve the dtypes, like this? 另外,是否可以像這樣保留dtype?
array([[ 1, nan, 0.2, nan],
[ 2, nan, nan, 0.5],
[ 3, nan, 0.2, 0.5],
[ 4, 0.1, 0.2, nan],
[ 5, 0.1, 0.2, 0.5],
[ 6, 0.1, nan, 0.5],
[ 7, 0.1, nan, nan]],
dtype=[('ID', '<i4'), ('A', '<f8'), ('B', '<f8'), ('B', '<f8')])
or similar? 或類似的?
#1樓
參考:https://stackoom.com/question/tKk6/將pandas數據框轉換爲NumPy數組
#2樓
You can use the to_records
method, but have to play around a bit with the dtypes if they are not what you want from the get go. 您可以使用to_records
方法,但是如果dtype不是您一開始就不想要的類型,則必須對其進行一些操作。 In my case, having copied your DF from a string, the index type is string (represented by an object
dtype in pandas): 就我而言,從字符串複製了DF,索引類型爲字符串(由pandas中的dtype object
表示):
In [102]: df
Out[102]:
label A B C
ID
1 NaN 0.2 NaN
2 NaN NaN 0.5
3 NaN 0.2 0.5
4 0.1 0.2 NaN
5 0.1 0.2 0.5
6 0.1 NaN 0.5
7 0.1 NaN NaN
In [103]: df.index.dtype
Out[103]: dtype('object')
In [104]: df.to_records()
Out[104]:
rec.array([(1, nan, 0.2, nan), (2, nan, nan, 0.5), (3, nan, 0.2, 0.5),
(4, 0.1, 0.2, nan), (5, 0.1, 0.2, 0.5), (6, 0.1, nan, 0.5),
(7, 0.1, nan, nan)],
dtype=[('index', '|O8'), ('A', '<f8'), ('B', '<f8'), ('C', '<f8')])
In [106]: df.to_records().dtype
Out[106]: dtype([('index', '|O8'), ('A', '<f8'), ('B', '<f8'), ('C', '<f8')])
Converting the recarray dtype does not work for me, but one can do this in Pandas already: 轉換recarray dtype對我不起作用,但是已經可以在Pandas中做到這一點:
In [109]: df.index = df.index.astype('i8')
In [111]: df.to_records().view([('ID', '<i8'), ('A', '<f8'), ('B', '<f8'), ('C', '<f8')])
Out[111]:
rec.array([(1, nan, 0.2, nan), (2, nan, nan, 0.5), (3, nan, 0.2, 0.5),
(4, 0.1, 0.2, nan), (5, 0.1, 0.2, 0.5), (6, 0.1, nan, 0.5),
(7, 0.1, nan, nan)],
dtype=[('ID', '<i8'), ('A', '<f8'), ('B', '<f8'), ('C', '<f8')])
Note that Pandas does not set the name of the index properly (to ID
) in the exported record array (a bug?), so we profit from the type conversion to also correct for that. 請注意,Pandas在導出的記錄數組中沒有正確設置索引名稱(至ID
)(錯誤?),因此我們可以從類型轉換中受益,也可以對此進行更正。
At the moment Pandas has only 8-byte integers, i8
, and floats, f8
(see this issue ). 目前,Pandas只有8個字節的整數i8
和浮點數f8
(請參閱此問題 )。
#3樓
I would just chain the DataFrame.reset_index() and DataFrame.values functions to get the Numpy representation of the dataframe, including the index: 我只需要鏈接DataFrame.reset_index()和DataFrame.values函數來獲得數據幀的Numpy表示,包括索引:
In [8]: df
Out[8]:
A B C
0 -0.982726 0.150726 0.691625
1 0.617297 -0.471879 0.505547
2 0.417123 -1.356803 -1.013499
3 -0.166363 -0.957758 1.178659
4 -0.164103 0.074516 -0.674325
5 -0.340169 -0.293698 1.231791
6 -1.062825 0.556273 1.508058
7 0.959610 0.247539 0.091333
[8 rows x 3 columns]
In [9]: df.reset_index().values
Out[9]:
array([[ 0. , -0.98272574, 0.150726 , 0.69162512],
[ 1. , 0.61729734, -0.47187926, 0.50554728],
[ 2. , 0.4171228 , -1.35680324, -1.01349922],
[ 3. , -0.16636303, -0.95775849, 1.17865945],
[ 4. , -0.16410334, 0.0745164 , -0.67432474],
[ 5. , -0.34016865, -0.29369841, 1.23179064],
[ 6. , -1.06282542, 0.55627285, 1.50805754],
[ 7. , 0.95961001, 0.24753911, 0.09133339]])
To get the dtypes we'd need to transform this ndarray into a structured array using view : 爲了獲得dtypes,我們需要使用view將此ndarray轉換爲結構化數組:
In [10]: df.reset_index().values.ravel().view(dtype=[('index', int), ('A', float), ('B', float), ('C', float)])
Out[10]:
array([( 0, -0.98272574, 0.150726 , 0.69162512),
( 1, 0.61729734, -0.47187926, 0.50554728),
( 2, 0.4171228 , -1.35680324, -1.01349922),
( 3, -0.16636303, -0.95775849, 1.17865945),
( 4, -0.16410334, 0.0745164 , -0.67432474),
( 5, -0.34016865, -0.29369841, 1.23179064),
( 6, -1.06282542, 0.55627285, 1.50805754),
( 7, 0.95961001, 0.24753911, 0.09133339),
dtype=[('index', '<i8'), ('A', '<f8'), ('B', '<f8'), ('C', '<f8')])
#4樓
Note : The .as_matrix()
method used in this answer is deprecated. 注意 :不.as_matrix()
使用此答案中的.as_matrix()
方法。 Pandas 0.23.4 warns: 熊貓0.23.4警告:
Method
.as_matrix
will be removed in a future version. 方法.as_matrix
將在以後的版本中刪除。 Use .values instead. 請改用.values。
Pandas has something built in... 熊貓內置一些東西...
numpy_matrix = df.as_matrix()
gives 給
array([[nan, 0.2, nan],
[nan, nan, 0.5],
[nan, 0.2, 0.5],
[0.1, 0.2, nan],
[0.1, 0.2, 0.5],
[0.1, nan, 0.5],
[0.1, nan, nan]])
#5樓
Here is my approach to making a structure array from a pandas DataFrame. 這是我從pandas DataFrame製作結構數組的方法。
Create the data frame 創建數據框
import pandas as pd
import numpy as np
import six
NaN = float('nan')
ID = [1, 2, 3, 4, 5, 6, 7]
A = [NaN, NaN, NaN, 0.1, 0.1, 0.1, 0.1]
B = [0.2, NaN, 0.2, 0.2, 0.2, NaN, NaN]
C = [NaN, 0.5, 0.5, NaN, 0.5, 0.5, NaN]
columns = {'A':A, 'B':B, 'C':C}
df = pd.DataFrame(columns, index=ID)
df.index.name = 'ID'
print(df)
A B C
ID
1 NaN 0.2 NaN
2 NaN NaN 0.5
3 NaN 0.2 0.5
4 0.1 0.2 NaN
5 0.1 0.2 0.5
6 0.1 NaN 0.5
7 0.1 NaN NaN
Define function to make a numpy structure array (not a record array) from a pandas DataFrame. 定義函數以從pandas DataFrame中創建一個numpy結構數組(而不是記錄數組)。
def df_to_sarray(df):
"""
Convert a pandas DataFrame object to a numpy structured array.
This is functionally equivalent to but more efficient than
np.array(df.to_array())
:param df: the data frame to convert
:return: a numpy structured array representation of df
"""
v = df.values
cols = df.columns
if six.PY2: # python 2 needs .encode() but 3 does not
types = [(cols[i].encode(), df[k].dtype.type) for (i, k) in enumerate(cols)]
else:
types = [(cols[i], df[k].dtype.type) for (i, k) in enumerate(cols)]
dtype = np.dtype(types)
z = np.zeros(v.shape[0], dtype)
for (i, k) in enumerate(z.dtype.names):
z[k] = v[:, i]
return z
Use reset_index
to make a new data frame that includes the index as part of its data. 使用reset_index
可以創建一個新數據框,其中將索引作爲其數據的一部分。 Convert that data frame to a structure array. 將該數據幀轉換爲結構數組。
sa = df_to_sarray(df.reset_index())
sa
array([(1L, nan, 0.2, nan), (2L, nan, nan, 0.5), (3L, nan, 0.2, 0.5),
(4L, 0.1, 0.2, nan), (5L, 0.1, 0.2, 0.5), (6L, 0.1, nan, 0.5),
(7L, 0.1, nan, nan)],
dtype=[('ID', '<i8'), ('A', '<f8'), ('B', '<f8'), ('C', '<f8')])
EDIT: Updated df_to_sarray to avoid error calling .encode() with python 3. Thanks to Joseph Garvin and halcyon for their comment and solution. 編輯:更新df_to_sarray以避免錯誤調用.encode()與Python 3.感謝約瑟夫·加爾文和寧靜爲他們的意見和解決方案。
#6樓
Further to meteore's answer, I found the code 除了隕石的答案,我找到了代碼
df.index = df.index.astype('i8')
doesn't work for me. 對我不起作用。 So I put my code here for the convenience of others stuck with this issue. 因此,我將代碼放在這裏,以方便陷入此問題的其他人。
city_cluster_df = pd.read_csv(text_filepath, encoding='utf-8')
# the field 'city_en' is a string, when converted to Numpy array, it will be an object
city_cluster_arr = city_cluster_df[['city_en','lat','lon','cluster','cluster_filtered']].to_records()
descr=city_cluster_arr.dtype.descr
# change the field 'city_en' to string type (the index for 'city_en' here is 1 because before the field is the row index of dataframe)
descr[1]=(descr[1][0], "S20")
newArr=city_cluster_arr.astype(np.dtype(descr))