http://bmcbioinformatics.biomedcentral.com/submission-guidelines/preparing-your-manuscript
1.Preparing your manuscript
每個分類要求必須有的章節不同
2.General formatting guidelines
2.1 Preparing main manuscript text
2.2 Preparing illustrations and figures
2.3 Preparing tables
2.4 Preparing additional files
2.5 Preparing main manuscript text
%%%%%%%%%%%%%%
2.1
雙倍行距； 行和頁數字；特殊字符嵌入式；不要用 page breaks;
文件格式：
Use double line spacing
Include line and page numbering
Use SI units: Please ensure that all special characters used are embedded in the text, otherwise they will be lost during conversion to PDF
Do not use page breaks in your manuscript
File formats
The following word processor file formats are acceptable for the main manuscript document:
Microsoft word (DOC, DOCX)
Rich text format (RTF)
TeX/LaTeX (use BioMed Central’s TeX template)
Please note: editable files are required for processing in production. If your manuscript contains any non-editable files (such as PDFs) you will be required to re-submit an editable file when you submit your revised manuscript, or after editorial acceptance in case no revision is necessary.
%%提交可編譯文件
Note that figures must be submitted as separate image files, not as part of the submitted manuscript file. For more information, see Preparing figures below.
2.2
%figure 要作爲單獨圖片文件上交，不要作爲手稿的一部分；
每個圖要適合單獨頁 在portrait 格式（landtrait format 將表格橫着放）；
tables 不要像圖片一樣提交作爲單獨的文件提交，但是需要包括在manuscript 裏邊（即tex文件裏）；
Figures should be provided as separate files, not embedded in the main manuscript file.
Each figure of a manuscript should be submitted as a single file that fits on a single page in portrait format.
Tables should NOT be submitted as figures but should be included in the main manuscript file.
%圖片組要作爲單獨的組文件？
圖片按照tex提及順序標號，上傳按照順序；
圖片 上傳 正確orientation 方向；
圖片標題、legends 要在manuscript提到，不要在graphic文件中。
Multi-panel figures (those with parts a, b, c, d etc.) should be submitted as a single composite file that contains all parts of the figure.
Figures should be numbered in the order they are first mentioned in the text, and uploaded in this order.
Figures should be uploaded in the correct orientation.
Figure titles (max 15 words) and legends (max 300 words) should be provided in the main manuscript, not in the graphic file
%圖片 keys (指圖例？) 需要在graphic 中，不要在legend（圖例） 上？？？.應該是說：legend指的是圖的說明，放在標題後邊的，caption裏邊的。 keys 指圖例。圖例直接畫在圖上，是這個意思吧！
圖片最小化空白空間 在圖解（illustration）中間的;
cropping figures: 修剪過的圖片；
Figure keys should be incorporated into the graphic, not into the legend of the figure.
Each figure should be closely cropped to minimize the amount of white space surrounding the illustration. Cropping figures improves accuracy when placing the figure in combination with other elements when the accepted manuscript is prepared for publication on our site. For more information on individual figure file formats, see our detailed instructions.
%< 10 MB
Individual figure files should not exceed 10 MB. If a suitable format is chosen, this file size is adequate for extremely high quality figures.
Please note that it is the responsibility of the author(s) to obtain permission from the copyright holder to reproduce figures (or tables) that have previously been published elsewhere. In order for all figures to be open access, authors must have permission from the rights holder if they wish to include images that have been published elsewhere in non open access journals. Permission should be indicated in the figure legend, and the original source included in the reference list.
Figure file types
We accept the following file formats for figures:
EPS (suitable for diagrams and/or images)
PDF (suitable for diagrams and/or images)
Microsoft Word (suitable for diagrams and/or images, figures must be a single page)
PowerPoint (suitable for diagrams and/or images, figures must be a single page)
TIFF (suitable for images)
JPEG (suitable for photographic images, less suitable for graphical images)
PNG (suitable for images)
BMP (suitable for images)
CDX (ChemDraw - suitable for molecular structures)
For information and suggestions of suitable file formats for specific figure types, please see our author academy.
Figure size and resolution
%圖片會在出版後resized
Figures are resized during publication of the final full text and PDF versions to conform to the BioMed Central standard dimensions, which are detailed below.
Figures on the web:
width of 600 pixels (standard), 1200 pixels (high resolution).
Figures in the final PDF version:
width of 85 mm for half page width figure
width of 170 mm for full page width figure
maximum height of 225 mm for figure and legend
image resolution of approximately 300 dpi (dots per inch) at the final size
Figures should be designed such that all information, including text, is legible at these dimensions. All lines should be wider than 0.25 pt when constrained to standard figure widths. All fonts must be embedded.
% 線條>0.25pt
Figure file compression
Vector figures should if possible be submitted as PDF files, which are usually more compact than EPS files.
TIFF files should be saved with LZW compression, which is lossless (decreases file size without decreasing quality) in order to minimize upload time.
JPEG files should be saved at maximum quality.
Conversion of images between file types (especially lossy formats such as JPEG) should be kept to a minimum to avoid degradation of quality.
If you have any questions or are experiencing a problem with figures, please contact the customer service team at [email protected].
2.3Preparing tables
%
Tables should be numbered and cited in the text in sequence using Arabic numerals (i.e. Table 1, Table 2 etc.).
Tables less than one A4 or Letter page in length can be placed in the appropriate location within the manuscript.
%適當位置
% end of the text file?
%引用+說明會出現在哪裏 so
太大可作爲additional file
Tables larger than one A4 or Letter page in length can be placed at the end of the document text file. Please cite and indicate where the table should appear at the relevant location in the text file so that the table can be added in the correct place during production.
Larger datasets, or tables too wide for A4 or Letter landscape page can be uploaded as additional files. Please see [below] for more information.
%扁平的數據（列表數據）可以作爲add’
%tile 上legends下
Tabular data provided as additional files can be uploaded as an Excel spreadsheet (.xls ) or comma separated values (.csv). Please use the standard file extensions.
Table titles (max 15 words) should be included above the table, and legends (max 300 words) should be included underneath the table.
%表格
Tables should not be embedded as figures or spreadsheet files, but should be formatted using ‘Table object’ function in your word processing program.
Color and shading may not be used. Parts of the table can be highlighted using superscript, numbering, lettering, symbols or bold text, the meaning of which should be explained in a table legend.
Commas should not be used to indicate numerical values.
If you have any questions or are experiencing a problem with tables, please contact the customer service team at [email protected].
!
This journal is an Open Access publication and an article-processing charge (APC) is levied on articles that are accepted for publication by the Editors.
To proceed, please click View Publication Charges which will take you to another window in order to select the relevant payment option.
Once the payment option has been confirmed you will return to this page where you must select the Proceed button below in order to complete your submission.
If your institution, society or other organization is a member, the APC amount may be wholly or partly covered by the membership arrangement. For an article to be eligible for APC coverage through institutional membership, the author submitting the article must be affiliated with the member institution.
We provide a free open access funding support service to help authors discover and apply for article processing charge funding. Learn more here.
APC waivers or discounts are granted on a case-by-case basis to authors with no or insufficient funds. Such waivers or discounts can be requested after you have clicked View Publication Charges and a decision will normally be made within two working days.
Submission of the article to the journal can be completed once the payment method has been agreed. Any applicable APC can be paid after editorial acceptance and must be paid prior to publication.
APCs for articles submitted from EU countries are subject to VAT (Value Added Tax). EU customers must supply their VAT Number to be exempt from VAT. UK Customers are not exempt from VAT. APCs for articles submitted from Japan are subject to JCT (Japanese Consumption Tax). If you choose to pay by a method other than by credit card, an administration surcharge will be applied.
For more information, see our article processing charge FAQ.
!
APC Agreement
Title:
CMSA: A heterogeneous CPU/GPU computing system for multiple similar RNA/DNA sequence alignment
Journal:
BMC Bioinformatics
Type:
software
Author:
Ce Yu, Xi Chen, Chen Wang, Shanjiang Tang, Quan Zou
You, the corresponding author, are required to arrange payment of a processing charge of £1,370/US$2,145/€1,745* if your article is accepted for publication. Since you are based in China, you will be charged the GBP price of £1,370. This fee helps to cover the cost of managing peer review, data conversion, and permanent online hosting (see more information about BioMed Central’s processing charges).
If your manuscript is accepted, you will be given the option of paying by credit card or invoice. If you believe that payment for your article is covered by an institutional membership arrangement, please let us know using the form below. In the case of genuine inability to pay, you should request a waiver of the processing charge now, also using the form below.
Submissions from EU countries are subject to VAT charges. The VAT rate charged will be the rate applicable to your country. Read more here. If you choose to pay by a method other than by credit card, there is a surcharge of £50.
I accept responsibility for paying the £1,370/US$2,145/€1,745 processing charge on this article
I would like to request a waiver of the article-processing charge for this article
I believe that I am covered by an institutional membership arrangement and wish to request institutional payment or discount (as applicable)
Confirm
